Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cog3-203ENSMUST00000227473 4197 ntBASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb1Q9CQ70 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gm16177-201ENSMUST00000120728 718 ntBASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gm1335-201ENSMUST00000121653 386 ntBASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gm29127-201ENSMUST00000188304 517 ntBASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb1Q9CQ70 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm27682-201ENSMUST00000183930 110 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm18584-201ENSMUST00000203098 964 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm5904-201ENSMUST00000210286 865 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms