Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm11618-201ENSMUST00000117946 267 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm12757-201ENSMUST00000119465 800 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm27514-201ENSMUST00000183692 110 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm37922-201ENSMUST00000195596 455 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 AC162934.3-201ENSMUST00000223015 841 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.47■□□□□ 0.23
Rtn4Q99P72 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rtn4Q99P72 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm22693-201ENSMUST00000175049 442 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm20574-201ENSMUST00000182867 917 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm38283-201ENSMUST00000193041 695 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm6013-201ENSMUST00000212264 699 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm7647-201ENSMUST00000200996 1389 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.46■□□□□ 0.23
Rtn4Q99P72 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn4Q99P72 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Rtn4Q99P72 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rtn4Q99P72 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rtn4Q99P72 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rtn4Q99P72 Gm15394-201ENSMUST00000119656 1308 ntBASIC16.45■□□□□ 0.22
Rtn4Q99P72 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC16.45■□□□□ 0.22
Rtn4Q99P72 Mir1247-201ENSMUST00000116706 82 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms