Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gtf2ird2Q99NI3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf2ird2Q99NI3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gtf2ird2Q99NI3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms