Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm7722-201ENSMUST00000120646 741 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm25881-201ENSMUST00000157783 103 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm26368-201ENSMUST00000157826 118 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm37299-201ENSMUST00000193951 826 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm42657-201ENSMUST00000201746 211 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm19187-201ENSMUST00000206781 892 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm18460-201ENSMUST00000208088 464 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm3619-201ENSMUST00000219947 775 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm19009-201ENSMUST00000223072 823 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm9625-201ENSMUST00000180422 955 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm6644-201ENSMUST00000186507 951 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col25a1Q99MQ5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col25a1Q99MQ5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col25a1Q99MQ5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms