Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm11628-201ENSMUST00000117568 171 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm13996-201ENSMUST00000118456 430 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm14704-201ENSMUST00000120300 874 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm9211-201ENSMUST00000182882 975 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm9555-201ENSMUST00000200908 583 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm44651-201ENSMUST00000207343 372 ntBASIC10.94□□□□□ -0.66
Scrt1Q99M85 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scrt1Q99M85 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.94□□□□□ -0.66
Scrt1Q99M85 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.94□□□□□ -0.66
Scrt1Q99M85 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.93□□□□□ -0.66
Scrt1Q99M85 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.93□□□□□ -0.66
Scrt1Q99M85 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms