Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col20a1Q923P0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm12266-201ENSMUST00000120311 962 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.67□□□□□ -0.06
Col20a1Q923P0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col20a1Q923P0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Gm43962-201ENSMUST00000203898 190 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Nsd1-205ENSMUST00000224693 852 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Gm12380-201ENSMUST00000119012 544 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col20a1Q923P0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.66□□□□□ -0.06
Col20a1Q923P0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col20a1Q923P0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms