Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Gm12196-201ENSMUST00000120954 262 ntBASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Gm44551-201ENSMUST00000208804 171 ntBASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhac2Q91Y09 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhac2Q91Y09 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhac2Q91Y09 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm14665-201ENSMUST00000122294 557 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm3332-201ENSMUST00000189337 928 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm4607-201ENSMUST00000206649 577 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm807-202ENSMUST00000224929 408 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms