Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb2Q91Y00 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm24255-201ENSMUST00000104481 128 ntBASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.24□□□□□ -0.29
Pcdhb2Q91Y00 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Gm15547-201ENSMUST00000122152 333 ntBASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Gm13570-201ENSMUST00000140763 309 ntBASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.23□□□□□ -0.29
Pcdhb2Q91Y00 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Gm24231-201ENSMUST00000104315 133 ntBASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb2Q91Y00 Gm12314-201ENSMUST00000118104 538 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms