Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm5369-201ENSMUST00000217499 588 ntBASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm5455-201ENSMUST00000058710 715 ntBASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb5Q91XZ5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm14058-201ENSMUST00000116082 735 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm26035-201ENSMUST00000083065 308 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm21811-201ENSMUST00000096485 930 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb5Q91XZ5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm13035-201ENSMUST00000117496 342 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm25881-201ENSMUST00000157783 103 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms