Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb6Q91XZ4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb6Q91XZ4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm27023-201ENSMUST00000182372 285 ntBASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm2546-201ENSMUST00000182630 991 ntBASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm45880-201ENSMUST00000213041 853 ntBASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb6Q91XZ4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm7046-201ENSMUST00000221351 977 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm9823-201ENSMUST00000051212 327 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb6Q91XZ4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms