Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vsx1Q91V10 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 Gm23251-201ENSMUST00000103773 110 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Mir6546-201ENSMUST00000184460 62 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 AY036118-201ENSMUST00000200021 923 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.33□□□□□ -0.44
Vsx1Q91V10 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.33□□□□□ -0.44
Vsx1Q91V10 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx1Q91V10 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm13035-201ENSMUST00000117496 342 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm7666-201ENSMUST00000146631 819 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm5616-201ENSMUST00000165252 384 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm8741-201ENSMUST00000174736 384 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm38210-201ENSMUST00000191944 809 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm19287-201ENSMUST00000203190 358 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm43916-201ENSMUST00000205062 967 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm19187-201ENSMUST00000206781 892 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.32□□□□□ -0.44
Vsx1Q91V10 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx1Q91V10 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms