Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm28911-201ENSMUST00000188837 117 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm7287-201ENSMUST00000205267 602 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SfpqQ8VIJ6 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Rmrp-201ENSMUST00000157463 271 ntBASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SfpqQ8VIJ6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Mir6977-201ENSMUST00000184960 64 ntBASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Gm37497-201ENSMUST00000195830 798 ntBASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SfpqQ8VIJ6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms