Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm15547-201ENSMUST00000122152 333 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm37201-201ENSMUST00000191845 523 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gm37466-201ENSMUST00000195692 652 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndc1Q8VCB1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Gm11930-201ENSMUST00000117788 190 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Gm8018-201ENSMUST00000173536 789 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Gm44967-201ENSMUST00000207047 631 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndc1Q8VCB1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms