Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Gm13015-201ENSMUST00000118674 204 ntBASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Gm26308-201ENSMUST00000157768 69 ntBASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Gm37954-201ENSMUST00000195400 2071 ntBASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc9Q8VC31 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm23935-201ENSMUST00000102303 57 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm24270-201ENSMUST00000102326 57 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm24245-201ENSMUST00000157318 57 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 AA619741-201ENSMUST00000195095 646 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm43575-201ENSMUST00000196420 516 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc9Q8VC31 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.96□□□□□ -0.02
Ccdc9Q8VC31 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc9Q8VC31 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc9Q8VC31 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc9Q8VC31 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc9Q8VC31 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gm43937-201ENSMUST00000204640 3122 ntBASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gm11298-201ENSMUST00000120503 1799 ntBASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc9Q8VC31 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms