Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm12029-201ENSMUST00000120073 832 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.47■□□□□ 0.39
Cd109Q8R422 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm4034-201ENSMUST00000187674 480 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 AC173482.6-201ENSMUST00000225889 1741 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm9129-201ENSMUST00000218173 1689 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 AC160405.1-201ENSMUST00000218207 1545 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm9279-201ENSMUST00000223175 1606 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm11628-201ENSMUST00000117568 171 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm15573-201ENSMUST00000119487 540 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm9630-201ENSMUST00000178304 885 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm27438-201ENSMUST00000183480 110 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Cd109Q8R422 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm18893-201ENSMUST00000198416 943 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.47■□□□□ 0.39
Cd109Q8R422 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Cd109Q8R422 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd109Q8R422 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cd109Q8R422 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cd109Q8R422 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cd109Q8R422 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.46■□□□□ 0.39
Cd109Q8R422 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Gm15004-201ENSMUST00000119192 630 ntBASIC17.46■□□□□ 0.39
Cd109Q8R422 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd109Q8R422 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC17.46■□□□□ 0.39
Cd109Q8R422 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC17.46■□□□□ 0.39
Cd109Q8R422 Gm17931-201ENSMUST00000208132 634 ntBASIC17.46■□□□□ 0.39
Cd109Q8R422 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC17.46■□□□□ 0.39
Cd109Q8R422 AC122876.1-201ENSMUST00000217619 825 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms