Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Gm27682-201ENSMUST00000183930 110 ntBASIC15.35■□□□□ 0.05
Smc5Q8CG46 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.35■□□□□ 0.05
Smc5Q8CG46 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.35■□□□□ 0.05
Smc5Q8CG46 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.35■□□□□ 0.05
Smc5Q8CG46 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc5Q8CG46 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Gm16177-201ENSMUST00000120728 718 ntBASIC15.34■□□□□ 0.05
Smc5Q8CG46 Gm9002-201ENSMUST00000178437 499 ntBASIC15.34■□□□□ 0.05
Smc5Q8CG46 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.34■□□□□ 0.05
Smc5Q8CG46 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.34■□□□□ 0.05
Smc5Q8CG46 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc5Q8CG46 Gm43061-201ENSMUST00000198850 2241 ntBASIC15.33■□□□□ 0.05
Smc5Q8CG46 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.33■□□□□ 0.05
Smc5Q8CG46 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Smc5Q8CG46 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm27847-201ENSMUST00000183711 107 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm27375-201ENSMUST00000183799 107 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm27486-201ENSMUST00000184923 80 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm45930-201ENSMUST00000221330 292 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm37849-201ENSMUST00000194722 1881 ntBASIC15.33■□□□□ 0.04
Smc5Q8CG46 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smc5Q8CG46 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc5Q8CG46 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms