Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc38Q8CDN8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.85□□□□□ -0.19
Ccdc38Q8CDN8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Matn2-203ENSMUST00000226766 3252 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm11591-201ENSMUST00000120063 702 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm17150-201ENSMUST00000165577 381 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm8018-201ENSMUST00000173536 789 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm9022-201ENSMUST00000182482 992 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm7063-201ENSMUST00000186840 981 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms