Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Mir7085-201ENSMUST00000184353 66 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc87Q8CDL9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Gm29127-201ENSMUST00000188304 517 ntBASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc87Q8CDL9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm13226-201ENSMUST00000117838 404 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm27331-201ENSMUST00000183705 60 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm43818-201ENSMUST00000200605 466 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm29705-201ENSMUST00000212598 474 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms