Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf31Q8CCF0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm14760-201ENSMUST00000121831 999 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Gm45186-201ENSMUST00000206874 478 ntBASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Prpf31Q8CCF0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm5070-201ENSMUST00000177599 862 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm26035-201ENSMUST00000083065 308 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf31Q8CCF0 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms