Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SynpoQ8CC35 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SynpoQ8CC35 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm13297-201ENSMUST00000120205 934 ntBASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.07□□□□□ -0.48
SynpoQ8CC35 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm7046-201ENSMUST00000221351 977 ntBASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm8227-201ENSMUST00000223306 571 ntBASIC12.07□□□□□ -0.48
SynpoQ8CC35 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.07□□□□□ -0.48
SynpoQ8CC35 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynpoQ8CC35 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm14381-201ENSMUST00000122105 414 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm27320-201ENSMUST00000184892 109 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.06□□□□□ -0.48
SynpoQ8CC35 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynpoQ8CC35 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms