Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Cog3-203ENSMUST00000227473 4197 ntBASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rd3Q8BRE0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm23699-201ENSMUST00000158835 135 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm5523-201ENSMUST00000180415 997 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm28071-201ENSMUST00000190355 478 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm37666-201ENSMUST00000194110 866 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm9996-201ENSMUST00000070359 913 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rd3Q8BRE0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Gm18304-201ENSMUST00000189162 546 ntBASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rd3Q8BRE0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms