Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sfr1Q8BP27 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sfr1Q8BP27 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sfr1Q8BP27 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sfr1Q8BP27 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm15703-201ENSMUST00000120250 880 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm43438-201ENSMUST00000198133 379 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm44405-201ENSMUST00000198952 126 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Olfr284-202ENSMUST00000206647 966 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Gm18935-201ENSMUST00000212692 664 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sfr1Q8BP27 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm8018-201ENSMUST00000173536 789 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm27501-201ENSMUST00000183599 107 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm37489-201ENSMUST00000191883 159 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm10608-202ENSMUST00000213924 676 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm7046-201ENSMUST00000221351 977 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sfr1Q8BP27 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms