Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm45594-201ENSMUST00000211717 241 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 AC154257.1-202ENSMUST00000224729 843 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm11354-201ENSMUST00000121974 422 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm22877-201ENSMUST00000175451 105 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm17798-201ENSMUST00000182282 1035 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm44506-201ENSMUST00000206278 965 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC16■□□□□ 0.15
Col16a1Q8BLX7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm28323-201ENSMUST00000186817 2499 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm9034-201ENSMUST00000182071 1005 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 Gm9192-201ENSMUST00000183221 985 ntBASIC16■□□□□ 0.15
Col16a1Q8BLX7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col16a1Q8BLX7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC16■□□□□ 0.15
Col16a1Q8BLX7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Mir6407-201ENSMUST00000184510 101 ntBASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col16a1Q8BLX7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms