Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Gm10434-201ENSMUST00000101158 471 ntBASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Gm15370-201ENSMUST00000117158 253 ntBASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm37489-201ENSMUST00000191883 159 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm43179-201ENSMUST00000198797 275 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm9368-201ENSMUST00000219348 831 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Srrm4Q8BKA3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Srrm4Q8BKA3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms