Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcal1Q8BJL0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcal1Q8BJL0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm23699-201ENSMUST00000158835 135 ntBASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Gm17827-201ENSMUST00000211825 742 ntBASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcal1Q8BJL0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms