Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm44124-201ENSMUST00000204159 472 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Olfr284-202ENSMUST00000206647 966 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm6013-201ENSMUST00000212264 699 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm10076-201ENSMUST00000073238 384 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atg4bQ8BGE6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm2546-201ENSMUST00000182630 991 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm29396-201ENSMUST00000185659 716 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Gm7046-201ENSMUST00000221351 977 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atg4bQ8BGE6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Gm14999-201ENSMUST00000121039 624 ntBASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.71□□□□□ -0.53
Atg4bQ8BGE6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms