Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm5186-201ENSMUST00000218781 920 ntBASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Gm24136-201ENSMUST00000083374 165 ntBASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc116Q80X53 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc116Q80X53 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm27731-201ENSMUST00000185192 107 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Map1b-203ENSMUST00000223725 2669 ntBASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc116Q80X53 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gm23931-201ENSMUST00000103842 109 ntBASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gm13226-201ENSMUST00000117838 404 ntBASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms