Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm18706-201ENSMUST00000210053 1066 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm5451-201ENSMUST00000080545 579 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Gm43807-201ENSMUST00000200678 1781 ntBASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Gm12218-201ENSMUST00000117666 399 ntBASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Gm17931-201ENSMUST00000208132 634 ntBASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slx4Q6P1D7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Gm23272-201ENSMUST00000104053 129 ntBASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Gm23680-201ENSMUST00000083162 164 ntBASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Ssr1-203ENSMUST00000225246 1825 ntBASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slx4Q6P1D7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Gm35713-201ENSMUST00000210516 199 ntBASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Gm45410-201ENSMUST00000211331 1093 ntBASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 CT030653.1-201ENSMUST00000224382 1279 ntBASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Gm2420-201ENSMUST00000119864 2149 ntBASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slx4Q6P1D7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm15036-201ENSMUST00000118880 400 ntBASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm18201-201ENSMUST00000174735 875 ntBASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm5298-201ENSMUST00000201122 892 ntBASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms