Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.27□□□□□ -0.45
VclQ64727 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.27□□□□□ -0.45
VclQ64727 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.27□□□□□ -0.45
VclQ64727 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.27□□□□□ -0.45
VclQ64727 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.27□□□□□ -0.45
VclQ64727 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.26□□□□□ -0.45
VclQ64727 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.26□□□□□ -0.45
VclQ64727 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.26□□□□□ -0.45
VclQ64727 Gm27320-201ENSMUST00000184892 109 ntBASIC12.26□□□□□ -0.45
VclQ64727 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.26□□□□□ -0.45
VclQ64727 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VclQ64727 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
VclQ64727 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VclQ64727 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.25□□□□□ -0.45
VclQ64727 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.25□□□□□ -0.45
VclQ64727 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.25□□□□□ -0.45
VclQ64727 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.25□□□□□ -0.45
VclQ64727 Gm14726-201ENSMUST00000120623 896 ntBASIC12.25□□□□□ -0.45
VclQ64727 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm20482-202ENSMUST00000174729 825 ntBASIC12.25□□□□□ -0.45
VclQ64727 Mir6420-201ENSMUST00000185032 102 ntBASIC12.25□□□□□ -0.45
VclQ64727 Gm31256-201ENSMUST00000194705 506 ntBASIC12.25□□□□□ -0.45
VclQ64727 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.25□□□□□ -0.45
VclQ64727 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Gm43758-201ENSMUST00000199500 367 ntBASIC12.25□□□□□ -0.45
VclQ64727 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VclQ64727 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VclQ64727 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms