Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.54□□□□□ -0.4
Six4Q61321 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.54□□□□□ -0.4
Six4Q61321 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six4Q61321 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.54□□□□□ -0.4
Six4Q61321 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.53□□□□□ -0.4
Six4Q61321 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Six4Q61321 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.53□□□□□ -0.4
Six4Q61321 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Six4Q61321 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.53□□□□□ -0.4
Six4Q61321 Gm14726-201ENSMUST00000120623 896 ntBASIC12.53□□□□□ -0.4
Six4Q61321 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.53□□□□□ -0.4
Six4Q61321 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six4Q61321 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.53□□□□□ -0.4
Six4Q61321 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six4Q61321 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six4Q61321 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six4Q61321 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Six4Q61321 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Six4Q61321 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Six4Q61321 Gm24255-201ENSMUST00000104481 128 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Six4Q61321 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.52□□□□□ -0.41
Six4Q61321 Gm7584-201ENSMUST00000175829 940 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Gm37259-201ENSMUST00000193903 849 ntBASIC12.52□□□□□ -0.41
Six4Q61321 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Gm3961-201ENSMUST00000204425 994 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Gm7783-201ENSMUST00000204795 781 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.52□□□□□ -0.41
Six4Q61321 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms