Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col12a1Q60847 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.96□□□□□ -0.49
Col12a1Q60847 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Col12a1Q60847 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.96□□□□□ -0.49
Col12a1Q60847 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.96□□□□□ -0.49
Col12a1Q60847 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.96□□□□□ -0.49
Col12a1Q60847 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col12a1Q60847 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col12a1Q60847 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Gm11244-201ENSMUST00000121243 237 ntBASIC11.96□□□□□ -0.5
Col12a1Q60847 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Gm2345-201ENSMUST00000193451 589 ntBASIC11.96□□□□□ -0.5
Col12a1Q60847 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.96□□□□□ -0.5
Col12a1Q60847 Gm45085-201ENSMUST00000209100 441 ntBASIC11.96□□□□□ -0.5
Col12a1Q60847 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.96□□□□□ -0.5
Col12a1Q60847 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Col12a1Q60847 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Col12a1Q60847 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.96□□□□□ -0.5
Col12a1Q60847 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col12a1Q60847 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col12a1Q60847 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Col12a1Q60847 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm29304-201ENSMUST00000186555 695 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm29223-201ENSMUST00000188867 695 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm37921-201ENSMUST00000194333 695 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col12a1Q60847 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm42430-201ENSMUST00000197209 616 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm43249-201ENSMUST00000200464 458 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm38007-201ENSMUST00000192187 313 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.95□□□□□ -0.5
Col12a1Q60847 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.95□□□□□ -0.5
Col12a1Q60847 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col12a1Q60847 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm13171-201ENSMUST00000117233 391 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm13981-201ENSMUST00000122360 447 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm26875-201ENSMUST00000181006 950 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm6564-201ENSMUST00000075377 619 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms