Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim41Q5NCC3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gm11892-201ENSMUST00000117711 1202 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gm23119-201ENSMUST00000158610 140 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Gm9463-201ENSMUST00000206707 601 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim41Q5NCC3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Gm15036-201ENSMUST00000118880 400 ntBASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Gm5616-201ENSMUST00000165252 384 ntBASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Gm4862-201ENSMUST00000170405 438 ntBASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Gm8741-201ENSMUST00000174736 384 ntBASIC21.61■■□□□ 1.05
Trim41Q5NCC3 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim41Q5NCC3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm23949-201ENSMUST00000104027 127 ntBASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm12380-201ENSMUST00000119012 544 ntBASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm44958-201ENSMUST00000203734 736 ntBASIC21.6■■□□□ 1.05
Trim41Q5NCC3 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim41Q5NCC3 Gm9947-201ENSMUST00000067599 2920 ntBASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Gm27627-201ENSMUST00000183644 150 ntBASIC21.59■■□□□ 1.05
Trim41Q5NCC3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms