Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Gm14660-201ENSMUST00000119809 575 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 Gm13342-201ENSMUST00000121055 207 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.14□□□□□ -0.15
Gm28047Q3US59 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm13226-201ENSMUST00000117838 404 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm45784-201ENSMUST00000188360 142 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm43438-201ENSMUST00000198133 379 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm10076-201ENSMUST00000073238 384 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Map1b-203ENSMUST00000223725 2669 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.13□□□□□ -0.15
Gm28047Q3US59 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm28047Q3US59 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Gm35960-201ENSMUST00000202712 767 ntBASIC14.12□□□□□ -0.15
Gm28047Q3US59 Gm44958-201ENSMUST00000203734 736 ntBASIC14.12□□□□□ -0.15
Gm28047Q3US59 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms