Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm23132-201ENSMUST00000104254 132 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm4943-201ENSMUST00000132879 424 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm25394-201ENSMUST00000157338 133 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm43997-201ENSMUST00000203986 1005 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm10263-201ENSMUST00000085163 300 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.42□□□□□ -0.1
Rnf180Q3U827 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf180Q3U827 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm5210-201ENSMUST00000182150 1010 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm2474-201ENSMUST00000195162 559 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Gm43866-201ENSMUST00000203894 839 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf180Q3U827 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.41□□□□□ -0.1
Rnf180Q3U827 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf180Q3U827 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms