Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm24845-201ENSMUST00000158034 109 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Mir6420-201ENSMUST00000185032 102 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.72□□□□□ -0.53
Mmp25Q3U435 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp25Q3U435 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm22323-201ENSMUST00000103832 109 ntBASIC11.71□□□□□ -0.53
Mmp25Q3U435 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm37259-201ENSMUST00000193903 849 ntBASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm42937-201ENSMUST00000197360 752 ntBASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.71□□□□□ -0.53
Mmp25Q3U435 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.71□□□□□ -0.53
Mmp25Q3U435 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Mmp25Q3U435 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp25Q3U435 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms