Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm27682-201ENSMUST00000183930 110 ntBASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm5035-201ENSMUST00000215581 927 ntBASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cul4aQ3TCH7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Gm12314-201ENSMUST00000118104 538 ntBASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Gm4034-201ENSMUST00000187674 480 ntBASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.04□□□□□ -0.32
Cul4aQ3TCH7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm9083-201ENSMUST00000120423 819 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm16177-201ENSMUST00000120728 718 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm45930-201ENSMUST00000221330 292 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms