Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Q3KNL4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Gm4768-201ENSMUST00000206199 686 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Gm29705-201ENSMUST00000212598 474 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.21□□□□□ -0.45
Q3KNL4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Q3KNL4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Gm27839-201ENSMUST00000184242 106 ntBASIC12.21□□□□□ -0.45
Q3KNL4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Gm10012-201ENSMUST00000078252 192 ntBASIC12.21□□□□□ -0.45
Q3KNL4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.21□□□□□ -0.45
Q3KNL4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3KNL4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3KNL4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Q3KNL4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3KNL4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3KNL4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3KNL4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.21□□□□□ -0.46
Q3KNL4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3KNL4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Q3KNL4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Q3KNL4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Q3KNL4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Q3KNL4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Q3KNL4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Q3KNL4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Q3KNL4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.2□□□□□ -0.46
Q3KNL4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Q3KNL4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gm24644-201ENSMUST00000157114 139 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gm27331-201ENSMUST00000183705 60 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Gm27847-201ENSMUST00000183711 107 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Gm27375-201ENSMUST00000183799 107 ntBASIC12.2□□□□□ -0.46
Q3KNL4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.2□□□□□ -0.46
Q3KNL4 Gm9794-201ENSMUST00000202370 423 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Q3KNL4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Q3KNL4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms