Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.13□□□□□ -0.31
Sox8Q04886 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox8Q04886 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox8Q04886 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.13□□□□□ -0.31
Sox8Q04886 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.13□□□□□ -0.31
Sox8Q04886 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox8Q04886 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.13□□□□□ -0.31
Sox8Q04886 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox8Q04886 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox8Q04886 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.13□□□□□ -0.31
Sox8Q04886 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.12□□□□□ -0.31
Sox8Q04886 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox8Q04886 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox8Q04886 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox8Q04886 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox8Q04886 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Gm24934-201ENSMUST00000103764 111 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 Gm12015-201ENSMUST00000117065 843 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 Gm14208-201ENSMUST00000119645 678 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox8Q04886 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Rprl1-202ENSMUST00000198476 238 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 Gm9996-201ENSMUST00000070359 913 ntBASIC13.11□□□□□ -0.31
Sox8Q04886 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox8Q04886 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Sox8Q04886 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox8Q04886 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox8Q04886 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox8Q04886 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Sox8Q04886 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms