Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Scn1bP97952 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.38□□□□□ -0.59
Scn1bP97952 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.37□□□□□ -0.59
Scn1bP97952 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Scn1bP97952 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Scn1bP97952 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Gm38144-201ENSMUST00000192790 465 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.37□□□□□ -0.59
Scn1bP97952 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.37□□□□□ -0.59
Scn1bP97952 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Scn1bP97952 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Scn1bP97952 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Scn1bP97952 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.37□□□□□ -0.59
Scn1bP97952 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scn1bP97952 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.37□□□□□ -0.59
Scn1bP97952 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm12151-201ENSMUST00000121374 290 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm25927-201ENSMUST00000175058 117 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm20445-201ENSMUST00000061905 565 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.36□□□□□ -0.59
Scn1bP97952 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Scn1bP97952 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scn1bP97952 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scn1bP97952 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scn1bP97952 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scn1bP97952 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scn1bP97952 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms