Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.68□□□□□ -0.38
Thumpd3P97770 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd3P97770 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm44124-201ENSMUST00000204159 472 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd3P97770 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.67□□□□□ -0.38
Thumpd3P97770 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd3P97770 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.66□□□□□ -0.38
Thumpd3P97770 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Gm16372-201ENSMUST00000073088 450 ntBASIC12.66□□□□□ -0.38
Thumpd3P97770 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.66□□□□□ -0.38
Thumpd3P97770 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.66□□□□□ -0.38
Thumpd3P97770 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd3P97770 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd3P97770 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thumpd3P97770 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thumpd3P97770 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thumpd3P97770 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Thumpd3P97770 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Thumpd3P97770 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms