Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.51□□□□□ -0.57
Cacna1aP97445 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Mir671-201ENSMUST00000102432 98 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cacna1aP97445 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm37246-201ENSMUST00000192665 835 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm12501-201ENSMUST00000119163 529 ntBASIC11.5□□□□□ -0.57
Cacna1aP97445 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.5□□□□□ -0.57
Cacna1aP97445 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cacna1aP97445 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cacna1aP97445 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.49□□□□□ -0.57
Cacna1aP97445 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.49□□□□□ -0.57
Cacna1aP97445 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cacna1aP97445 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cacna1aP97445 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.49□□□□□ -0.57
Cacna1aP97445 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.49□□□□□ -0.57
Cacna1aP97445 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms