Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.75□□□□□ -0.69
Otx1P80205 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.75□□□□□ -0.69
Otx1P80205 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Otx1P80205 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.74□□□□□ -0.69
Otx1P80205 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Otx1P80205 Gm12058-201ENSMUST00000118614 437 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Gm14723-201ENSMUST00000118686 215 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.74□□□□□ -0.69
Otx1P80205 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.74□□□□□ -0.69
Otx1P80205 Gm13316-201ENSMUST00000140537 691 ntBASIC10.74□□□□□ -0.69
Otx1P80205 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Gm38002-201ENSMUST00000193255 180 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Gm43133-201ENSMUST00000197472 463 ntBASIC10.74□□□□□ -0.69
Otx1P80205 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.74□□□□□ -0.69
Otx1P80205 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.74□□□□□ -0.69
Otx1P80205 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.74□□□□□ -0.69
Otx1P80205 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Otx1P80205 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Otx1P80205 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Otx1P80205 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Otx1P80205 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otx1P80205 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.73□□□□□ -0.69
Otx1P80205 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Otx1P80205 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Mir8109-201ENSMUST00000184375 117 ntBASIC10.73□□□□□ -0.69
Otx1P80205 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.73□□□□□ -0.69
Otx1P80205 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.73□□□□□ -0.69
Otx1P80205 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.73□□□□□ -0.69
Otx1P80205 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Otx1P80205 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Otx1P80205 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otx1P80205 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms