Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgb1P63158 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.72□□□□□ -0.21
Hmgb1P63158 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.72□□□□□ -0.21
Hmgb1P63158 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.72□□□□□ -0.21
Hmgb1P63158 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb1P63158 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb1P63158 Gm45132-201ENSMUST00000207234 2542 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Hmgb1P63158 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.71□□□□□ -0.21
Hmgb1P63158 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Hmgb1P63158 Gm11964-201ENSMUST00000120982 444 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Hmgb1P63158 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Hmgb1P63158 Gm24136-201ENSMUST00000083374 165 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb1P63158 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 CT009713.5-203ENSMUST00000224218 2079 ntBASIC13.71□□□□□ -0.21
Hmgb1P63158 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb1P63158 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb1P63158 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC13.71□□□□□ -0.22
Hmgb1P63158 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.7□□□□□ -0.22
Hmgb1P63158 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.7□□□□□ -0.22
Hmgb1P63158 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms