Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm43433-201ENSMUST00000196573 481 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm6P62313 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Lsm6P62313 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Gm13736-201ENSMUST00000119272 253 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.93□□□□□ -0.66
Lsm6P62313 Mir1982-201ENSMUST00000157368 74 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Snora78-201ENSMUST00000158630 128 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Gm27514-201ENSMUST00000183692 110 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Gm18304-201ENSMUST00000189162 546 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.93□□□□□ -0.66
Lsm6P62313 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.93□□□□□ -0.66
Lsm6P62313 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm6P62313 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm6P62313 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Lsm6P62313 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Lsm6P62313 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.92□□□□□ -0.66
Lsm6P62313 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.92□□□□□ -0.66
Lsm6P62313 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Lsm6P62313 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Lsm6P62313 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 172.9 ms