Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cks1bP61025 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.92□□□□□ -0.98
Cks1bP61025 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cks1bP61025 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm5648-201ENSMUST00000122244 1587 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm43273-201ENSMUST00000199649 2594 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Cks1bP61025 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm25144-201ENSMUST00000179561 110 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm25352-201ENSMUST00000179815 110 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm3436-201ENSMUST00000179930 840 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm27622-201ENSMUST00000183779 60 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Mir7221-201ENSMUST00000184009 72 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm27525-201ENSMUST00000184465 107 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm27430-201ENSMUST00000184585 107 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm44333-201ENSMUST00000197168 107 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm19931-201ENSMUST00000198920 368 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 AC154621.1-201ENSMUST00000226155 1119 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.91□□□□□ -0.98
Cks1bP61025 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cks1bP61025 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cks1bP61025 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1bP61025 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Cks1bP61025 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Gm7224-201ENSMUST00000121359 2066 ntBASIC8.9□□□□□ -0.98
Cks1bP61025 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.9□□□□□ -0.98
Cks1bP61025 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cks1bP61025 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cks1bP61025 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Cks1bP61025 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Cks1bP61025 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cks1bP61025 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1bP61025 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cks1bP61025 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms