Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lim2P56563 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lim2P56563 Gm11531-201ENSMUST00000117614 555 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm11222-201ENSMUST00000119005 738 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm13315-201ENSMUST00000120376 991 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm11597-201ENSMUST00000121423 964 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Rmrp-201ENSMUST00000157463 271 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Gm37201-201ENSMUST00000191845 523 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Gm21769-201ENSMUST00000211922 111 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Gm5950-201ENSMUST00000213337 772 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.44□□□□□ -0.42
Lim2P56563 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.44□□□□□ -0.42
Lim2P56563 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Lim2P56563 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.44□□□□□ -0.42
Lim2P56563 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lim2P56563 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lim2P56563 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lim2P56563 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.43□□□□□ -0.42
Lim2P56563 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Gm24231-201ENSMUST00000104315 133 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lim2P56563 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Lim2P56563 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.43□□□□□ -0.42
Lim2P56563 Gm26956-201ENSMUST00000182176 986 ntBASIC12.43□□□□□ -0.42
Lim2P56563 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.43□□□□□ -0.42
Lim2P56563 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Gm7783-201ENSMUST00000204795 781 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Gm30285-201ENSMUST00000214614 422 ntBASIC12.43□□□□□ -0.42
Lim2P56563 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.43□□□□□ -0.42
Lim2P56563 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lim2P56563 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.43□□□□□ -0.42
Lim2P56563 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.43□□□□□ -0.42
Lim2P56563 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lim2P56563 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lim2P56563 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lim2P56563 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms