Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rrp1P56183 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.02□□□□□ -0.16
Rrp1P56183 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rrp1P56183 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.02□□□□□ -0.16
Rrp1P56183 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.02□□□□□ -0.16
Rrp1P56183 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Rrp1P56183 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrp1P56183 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rrp1P56183 Gm9022-201ENSMUST00000182482 992 ntBASIC14.02□□□□□ -0.17
Rrp1P56183 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.02□□□□□ -0.17
Rrp1P56183 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.02□□□□□ -0.17
Rrp1P56183 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrp1P56183 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrp1P56183 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.02□□□□□ -0.17
Rrp1P56183 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rrp1P56183 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.01□□□□□ -0.17
Rrp1P56183 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.01□□□□□ -0.17
Rrp1P56183 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.01□□□□□ -0.17
Rrp1P56183 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.01□□□□□ -0.17
Rrp1P56183 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm8602-201ENSMUST00000184045 607 ntBASIC14.01□□□□□ -0.17
Rrp1P56183 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.01□□□□□ -0.17
Rrp1P56183 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rrp1P56183 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rrp1P56183 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rrp1P56183 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Rrp1P56183 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gm15897-201ENSMUST00000117770 1486 ntBASIC14□□□□□ -0.17
Rrp1P56183 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rrp1P56183 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rrp1P56183 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Rrp1P56183 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms