Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Fdft1P53798 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Fdft1P53798 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Fdft1P53798 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.44□□□□□ -0.42
Fdft1P53798 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.44□□□□□ -0.42
Fdft1P53798 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.44□□□□□ -0.42
Fdft1P53798 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.44□□□□□ -0.42
Fdft1P53798 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Fdft1P53798 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.44□□□□□ -0.42
Fdft1P53798 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Fdft1P53798 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Fdft1P53798 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fdft1P53798 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fdft1P53798 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.43□□□□□ -0.42
Fdft1P53798 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Fdft1P53798 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Fdft1P53798 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Fdft1P53798 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.43□□□□□ -0.42
Fdft1P53798 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Fdft1P53798 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fdft1P53798 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.43□□□□□ -0.42
Fdft1P53798 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms