Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox2P48432 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox2P48432 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.65□□□□□ -0.54
Sox2P48432 Gm20949-201ENSMUST00000206478 952 ntBASIC11.65□□□□□ -0.54
Sox2P48432 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox2P48432 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sox2P48432 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Sox2P48432 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox2P48432 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Sox2P48432 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox2P48432 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox2P48432 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Gm2495-201ENSMUST00000191160 466 ntBASIC11.64□□□□□ -0.55
Sox2P48432 Gm37917-201ENSMUST00000194711 392 ntBASIC11.64□□□□□ -0.55
Sox2P48432 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.64□□□□□ -0.55
Sox2P48432 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Sox2P48432 Gm18624-201ENSMUST00000220966 658 ntBASIC11.64□□□□□ -0.55
Sox2P48432 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.64□□□□□ -0.55
Sox2P48432 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.64□□□□□ -0.55
Sox2P48432 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox2P48432 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox2P48432 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.64□□□□□ -0.55
Sox2P48432 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.64□□□□□ -0.55
Sox2P48432 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox2P48432 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox2P48432 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.63□□□□□ -0.55
Sox2P48432 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.63□□□□□ -0.55
Sox2P48432 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Sox2P48432 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox2P48432 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox2P48432 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox2P48432 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Gm12928-201ENSMUST00000117115 573 ntBASIC11.63□□□□□ -0.55
Sox2P48432 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.63□□□□□ -0.55
Sox2P48432 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Gm42599-201ENSMUST00000201308 469 ntBASIC11.63□□□□□ -0.55
Sox2P48432 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.63□□□□□ -0.55
Sox2P48432 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.63□□□□□ -0.55
Sox2P48432 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.63□□□□□ -0.55
Sox2P48432 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox2P48432 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox2P48432 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms