Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC7.99□□□□□ -1.13
Xcl1P47993 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC7.99□□□□□ -1.13
Xcl1P47993 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm29518-201ENSMUST00000190858 372 ntBASIC7.99□□□□□ -1.13
Xcl1P47993 Igkv2-116-201ENSMUST00000199327 362 ntBASIC7.99□□□□□ -1.13
Xcl1P47993 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Xcl1P47993 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC7.99□□□□□ -1.13
Xcl1P47993 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 AC154276.1-201ENSMUST00000228874 1299 ntBASIC7.99□□□□□ -1.13
Xcl1P47993 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Xcl1P47993 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Xcl1P47993 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Xcl1P47993 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Xcl1P47993 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC7.99□□□□□ -1.13
Xcl1P47993 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 AC129336.2-201ENSMUST00000218053 3086 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm44207-201ENSMUST00000204568 1424 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm11557-201ENSMUST00000120200 1008 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
Xcl1P47993 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm25016-201ENSMUST00000158399 131 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm6728-201ENSMUST00000178117 1065 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm8927-201ENSMUST00000181978 981 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Gm5177-201ENSMUST00000183092 997 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Xcl1P47993 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Ighv1-25-201ENSMUST00000195638 345 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Gm44415-201ENSMUST00000204151 2112 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Gm3222-201ENSMUST00000071282 990 ntBASIC7.98□□□□□ -1.13
Xcl1P47993 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Xcl1P47993 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Xcl1P47993 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms